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Research >>

Molecular Desorption Mass Spectrometry Research Group

Molecular desorption mass spectrometry research group at the Department of Physics of the University of Colombo formed in early eighties through a research link with the Uppsala University, Sweden. Our group initially began research with home built plasma desorption (PD) mass spectrometers. At present we are equipped with matrix-assisted laser desorption ionization (MALDI) and electrospray ionization (ESI) mass spectrometers coupled with time-of-flight (TOF) mass analyzers. These are the only MALDI mass spectrometers available in Sri Lanka.

Present activities of the project are focused in four main fields, namely

(i) instrumentation development

(ii) mechanistic studies related to ion physics and ion chemistry

(iii) applications of mass spectrometry relating to natural product chemistry, biology and medicine

(iv) providing of mass spectrometry services to chemists, bio-chemists and molecular biologists.

In the area of instrumentation development, our group had a home built PD-TOF mass spectrometer equipped with a second order ion reflector. Later the group had constructed a delayed ion extraction MALDI-TOF instrument with an ion reflector and also a multi reflection MALDI-TOF mass spectrometer. Recently our group received an ESI-TOF instrument from Uppsala, Sweden, which is in the installing stage.

In the area of mechanistic studies our group members have engaged in the studies of meta-stable decomposition of secondary ions and ionization mechanisms, studies on fast heavy ion induced luminescence studies from amino acids and some organic compounds and studies on matrix effects of low molecular weight compounds (such as alkaloids) using fast heavy ion and laser desorption ionization mass spectrometry.

The group has been engaged in research applications of mass spectrometry to natural products and biologically important compounds since 1990’s. This involves the analysis of active compounds isolated from medicinal and other plants grown in Sri Lanka. Our group has initiated an important project in collaboration with the cancer hospital. In this work, an attempt is being made to study the unspecific proteins developed in red cell membranes leukaemia AIHA (Post CLL) patients using MALDI mass spectrometry after separating them by SDS-page gel electrophoresis. It is believed that, if successful, this project may help diagnosis of the decease at early stages.

The group is now in a position to provide mass spectrometer facilities to natural product chemists, bio-chemists and to others who need them. In Sri Lanka, only a very few research institutions have conventional mass spectrometers, and are limited to GCMS instruments equipped with EI/CI ion sources, which are not suitable for mass analysis of heavy bio molecules such as proteins.

Group Members

Research Activities

Financial Support

Research Links and Collaboration

Publications

 

Group Members

Prof. T.R. Ariyaratne (Leader)

Dr. D.D.N. Barlo Daya

Dr. R.V. Coorey

Dr. (Mrs.) U.K. Abeywarne (From University of Kelaniya)

Dr. C.K.G. Piyadasa

D.U. Kottahachchi

J.V.P. Fernando – M.Phil student


Mechanistic Studies

· Studies of meta-stable decomposition of secondary ions

· Fast heavy ion induced luminescence studies from amino acids and some organic compounds

· Ionization mechanisms and matrix effects of fast heavy ion and laser desorption/ionization mass spectrometry

Applications

· Application of plasma desorption mass spectrometry (PDMS) and matrix-assisted laser desorption/ionization (MALDI) mass spectrometry to study natural products extracted from medicinal plants and bio-molecules

Mass analysis of organic metal complexes using PDMS and MALDI
Mass analysis of Lichens developed on the trunks of the trees grown in Sri Lanka using PDMS
Detection of proteins in biological fluids using MALDI
Detection of proteins from human red cell membranes of normal persons and leukemia patients using 1-D SDS-PAGE technique and MALDI

Instumentation

· Installation of a high resolution multi-reflection matrix assisted laser desorption/ionization time-of-flight (HRMR-MALDI-TOF) mass spectrometer

· Construction of a high resolution matrix assisted laser desorption/ionization time-of-flight (HR-MALDI-TOF) mass spectrometer for commercial purposes

 

Financial Support

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Research Links and Collaboration

International

  • Division of Ion Physics, Uppsala University, Sweden.

Local

  • Industrial Technology Institute (ITI), Sri Lanka (formally CISIR)
  • National Science Foundation (NSF), Sri Lanka (formally NARESA)

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Address: Department of Physics, University of Colombo, Colombo 00300, Sri Lanka.
Telephone: +94-112-584-777
FAX: +94-112-584-777
E-mail: office@phys.cmb.ac.lk

© Department of Physics, Faculty of Science, University of Colombo. Last Update: 20-09-2011. Site by Physics Department web team